VAST · Terra · C4 — citations

Vastopolis outbreak investigation. Citation list (design cites library workflows in prose form).

C4 Citation list (design cites library workflows in prose form)

The relevant workflow-library papers I drew on were:

Paper / workflow Relevant approach used in the recommended outbreak workflow
Human-Steered Topic Modelling — Choo et al. (2013), UTOPIAN: User-Driven Topic Modeling Based on Interactive Nonnegative Matrix Factorization Iteratively classify and refine microblog topics with analyst input; inspect documents, correct misleading terms, merge/split themes, and retrain.
Jigsaw: Supporting Investigative Analysis through Interactive Visualization — Stasko et al. (2008) Extract and validate entities such as places, hospitals, landmarks, organizations, and dates from posts; keep links to original text for evidential inspection.
From Movement Tracks through Events to Places — Andrienko et al. (2011) Identify significant locations through density-based clustering of repeated spatial/temporal events, then analyze their timing and spatial recurrence. Adapted here to symptom-report hotspots rather than movement events.
Spatio-temporal Analysis and Modelling — Andrienko & Andrienko (2013) Aggregate observations into spatial time series; group areas with similar temporal behavior; model temporal patterns; inspect spatial and temporal residuals to refine explanations.
Partition-Based Regression Modelling — Mühlbacher & Piringer (2013) Build interpretable explanatory models incrementally, inspect feature relationships visually, then use residual patterns to identify missing factors or interactions.
Detecting Stable Cross-Impact Patterns in Bivariate Time Series — Andrienko et al. (2026) Examine lagged relationships between a possible driver and later outcomes. Suggested for assessing whether changes in wind conditions consistently precede changes in downwind symptom-report activity.
MobilityGraphs: Visual Analysis of Mass Mobility Dynamics via Spatio-Temporal Graphs and Clustering — von Landesberger et al. (2016) Suggested as an optional extension if anonymized aggregate mobility flows become available, to assess whether mobility between areas explains the apparent progression of outbreak activity.

These papers informed the workflow structure; the epidemiological transmission hypotheses and validation requirements were designed specifically for the Vastopolis scenario.